miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|261618083|gb|FS029699.1|FS029699 AAAGAAGTGCTATTGATATTTTGAAGAACTGTTTGTTTGATAGATTCAGCAACAATGGCAGACCTCCTCTCCAACTATTC
AAGCAAATTAGAAGCAGTTCCTCCAAGTCACTGCTTGCCATTGCACGAAAGACCAGTGGATCCAGTTGAAATTGTGAACA
CTATTCCAGTAATTGATTTGGGAAAAGCTAAGGGGGATGAACGACCTGCTGTCGTTCAACAACTTATGAAAGCTTTTGAA
GAATATGGGTTTTTTCAGATAATCAATCATGGAGTACCCGAAAAATTGATGGAAGAGGCAATGAAAGTGTACAAGGAATT
TTTCAGTCTGCCAGCGGAAGAAAAAGAGAGATATGCAAAGGATGCAGCAAATAATACAGCAACAGGTGCAGCGAAAATGT
ACAGTAGCAGTGCCAAGCATTATGATTCAGAGGAGCATCGATACTGGAGGGATGTGTTGGAACATAGCGCCAATCTTGAC
GGGAAAGACAGAGAAACTTGGCCTGATAAGCCTTCAAGATATAGGGAGGTTATTGGTGAATATTCAGATGAATTGAGAAG
GGTGAGTAAGGTCATCCTGGGTATGGTAGCTGAAGGGCTAGGGTTGGAGCCAGGGTTCTTTGA




Most similar to sp|P24397|HY6H_HYONI

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P24397|HY6H_HYONI Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger
           GN=H6H PE=1 SV=1
          Length = 344

 Score =  140 bits (353), Expect = 6e-33
 Identities = 81/194 (41%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
 Frame = +1

Query: 55  MADLLSNYSSKLEAVPPSHCLPLHERPVDPVEIVNTIPVIDLGKAKGDERPAVVQQLMKA 234
           MA  +SN+S+K  +V  S   PL +R    V + N +P+IDL +        +VQQ+ KA
Sbjct: 1   MATFVSNWSTK--SVSESFIAPLQKRAEKDVPVGNDVPIIDLQQ----HHHLLVQQITKA 54

Query: 235 FEEYGFFQIINHGVPEKLMEEAMKVYKEFFSLPAEEKERYAK--DAA--NNTATGAAKMY 402
            +++G FQ+INHG PE+LM E M+V KEFF+LPAEEKE++    +AA         AK+Y
Sbjct: 55  CQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLY 114

Query: 403 SSSAKHYDSEEHRYWRDVLEHSAN-LDGKDRETWPDKPSRYREVIGEYSDELRRVSKVIL 579
               +   +EE  YW+D L H  + LD     +WP+KP++YREV+ +YS E+R+++  +L
Sbjct: 115 -VEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRML 173

Query: 580 GMVAEGLGLEPGFF 621
             + EGLGL+ G+F
Sbjct: 174 DYICEGLGLKLGYF 187